WGS of male D. affinis (Medium Y), pooled heads - SRA

SRX14298813: WGS of male D. affinis (Medium Y), pooled heads
1 ILLUMINA (Illumina HiSeq 2500) run: 9M spots, 1.8G bases, 788.6Mb downloads

Design: gDNA of D. affinis male (Medium Y) from heads

Submitted by: University of California - Berkeley

Study: Drosophila pseudoobscura and Drosophila affinis Y-replacement lines raw sequence reads

PRJNA799077 • SRP361596 • All experiments • All runs

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This study characterizes the differences between Y chromosome variants in the D. pseudoobscura group at the cytological, molecular, and sequence levels. A major goal of this study is to understand the role of repetitive elements in Y chromosome evolution. Data includes genomic DNA, H3K9me3 ChIP, and total stranded RNA from head/brain tissues and Oxford Nanopore from whole body tissue.

Sample:

SAMN25949481 • SRS12115817 • All experiments • All runs

Organism: Drosophila affinis

Library:

Name: Daff_YM_M_gDNA

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 9M spots, 1.8G bases, 788.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR18151024	9,010,171	1.8G	788.6Mb	2022-04-15

ID:: 20267973

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